Oxford Nanopore Open Datasets
The Oxford Nanopore Technologies Open Data (ont-open-data) provides reference sequencing data from Oxford Nanopore sequencing devices. Data access is provided through the Registry of Open Data on AWS.
Use of Oxford Nanopore Open Datasets
The data are freely available to all and can be used for:
- Exploration of the characteristics of nanopore sequence data,
- Assessment and reproduction of performance benchmarks,
- Example datasets for analysis on EPI2ME, Oxford Nanopore Technologies’ cloud compute infrastructure,
- Development of tools and methods.
The data deposited showcases DNA sequences from a representative subset of sequencing chemistries. The datasets correspond to publicly-available reference samples including the widely available Genome In A Bottle human reference samples. Raw data are provided with metadata and scripts to describe sample and data provenance.
Latest datasets and analyses
The list below represents the most recent dataset or analysis of its class. As new datasets, basecallers, and analysis methods are developed this list will change.
- Genome In a Bottle Ashkenazi trio sequenced with R10.4.1 and LSK114. (COMING SOON)
- Phased CpG modification calling with Remora in matched bisulfite and nanopore sequencing.
- Reduced Representation Methylation Sequencing (RRMS) Seqeuncing of two cancer normal pairs with adaptive sampling.
- D.melanogaster iso-1 D. melanogaster (iso-1) sequenced with R10.4.1 Kit 14.
We strive to keep all analyses current, though some may fall behind the more current sequencing runs and basecalling results.
Archived datasets
Historical datasets can also by found in the repository. Our previous data release blog posts are archived under the data-releases category.
Data access
All data is available under from the Registry of Open Data on AWS. See the Oxford Nanopore Open Data Tutorials page for more information.
Information